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Science Feature Articles</p>

Watch for Flying Elephants

English
 

Dr. Michal Sharon. Scientist and mother

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
Dumbo may have been ridiculed by his fellow elephants, but his flying skills have been evoked to describe a revolutionary advance in protein science. John Fenn, who received the 2002 Nobel Prize in Chemistry for inventing a technique that makes it possible to study the structure of large, bulky proteins by flying them in the air, said in his prize acceptance speech that his approach provided “wings for molecular elephants.”
 
Dr. Michal Sharon of the Weizmann Institute’s Biological Chemistry Department is taking this technique a step further: She is providing wings for entire “herds” of molecular elephants. She launches not just individual proteins but entire protein complexes into the air in order to clarify their structure.
 
The major protein complex that takes flight in her lab is a large molecular machine called the proteasome, whose job in the cell is to break down unwanted proteins. Such recycling is central to a multitude of cellular events, from DNA repair to programmed cell death, while disruptions in proteasome functioning can lead to a host of diseases: Clumps of proteins that have not been properly taken apart can lead to Alzheimer’s and other neurodegenerative diseases. Failure to break down molecules that stimulate cell division can lead to the uncontrolled cell proliferation and growth that occurs in cancer. The improper breakdown of proteins might even trigger a mistaken response from the immune system – for example, in the form of autoimmune disease. Establishing how the proteasome works, then, is essential for understanding and treating numerous diseases.
 
Sharon’s lab at Weizmann is the first in Israel – and one of only a handful in the world – to study large protein complexes by mass spectroscopy, which provides unique insights into protein structure (see box). Elucidating the proteasome’s structure is an enormous challenge: At least 33 different proteins – a huge assembly of “molecular elephants” – along with additional short-lived protein molecules, interact to create each proteasome.
 
Sharon is pursuing three major projects. One concerns a proteasome particle called 19S, known as the “brain” because it identifies the proteins to be broken down. During her postdoctoral studies at the University of Cambridge, she already determined part of its structure; now she plans to determine the architecture of the entire “brain,” which includes 18 different subunits. In another project, conducted in collaboration with Profs. Chaim Kahana and Yosef Shaul of Weizmann’s Molecular Genetics Department, Sharon focuses on a second proteasome molecule, called 20S. The scientists are testing the hypothesis that this particle serves as the cell’s “vacuum cleaner,” removing all proteins that are naturally unfolded. In the third project, Sharon investigates the structure of yet another protein complex, the signalosome, whose job is to regulate the placement of special tags on proteins that need to be broken down so that the proteasome’s “brain” can identify them.
 
These studies are aimed at determining the structure of the proteasome and other biological complexes in minutest detail, a feat that was unthinkable before the advent of the latest technologies. Knowing the structure, in turn, provides valuable information about the way these complexes function in both health and disease.
 
Flying elephants in the lab
 

 

 

 

 

 

 

 

 

 

 

 

 

Mass Spectroscopy in Biology

 

Mass spectroscopy, whose foundations were laid in 1898, has various uses, from identifying substances to defining their structure. A substance is vaporized into a gas consisting of charged particles, and the properties of these particles are analyzed on the basis of their mass-to-charge ratio. Initially, large biological molecules could not be studied in this manner because they didn’t survive the “bombardment” needed to turn them into a gas. Biologists started using mass spectroscopy to study protein structure only in the 1980s, with the invention of techniques for gently flying proteins in the air, such as John Fenn’s electrospray. Equipment for exploring entire protein complexes, which became available in the late 1990s, is found in only few laboratories around the world, including Sharon’s lab at Weizmann.
 
In Sharon’s mass spectroscopy machines, microscopic amounts of a protein complex are passed through a thin gold-plated tube and dispersed within a chamber as a spray of charged drops. The technique, referred to as nano-electrospray, allows scientists to study minute quantities of material and analyze non-uniform and asymmetric complexes, which is particularly important for investigating such biological complexes as the proteasome.
 

Scientist and Mother


Born in Jerusalem, Dr. Michal Sharon earned her Ph.D. from the Weizmann Institute under the guidance of Prof. Jacob Anglister. Her doctoral research focused on the structure of HIV, the virus that causes AIDS. After spending four years as a postdoctoral fellow at the University of Cambridge, she joined the Weizmann staff in the fall of 2007. She is the mother of three: a 9-year-old boy and two girls, aged 7 and 1. Her secret for successfully combining scientific work with motherhood: a strong drive, effective time management and a supportive husband – Alon, whom she met during her army service, when they were both field school instructors in the Negev.


 Dr. Michal Sharon’s research is supported by the Y. Leon Benoziyo Institute for Molecular Medicine; the Helen and Milton A. Kimmelman Center for Biomolecular Structure and Assembly; the Chais Family Fellows Program for New Scientists; the Wolfson Family Charitable Trust; Karen Siem, UK; and the estate of Shlomo (Stanislav) and Sabine Bierzwinsky. Dr. Sharon is the incumbent of the Elaine Blond Career Development Chair in Perpetuity.

 
Illustration: Flying elephants in the lab
Life Sciences
English

The Power of Emotion

English
Dr. Rony Paz. Emotional context of a memory
 
 
H
 
Do you remember where you were when the first man landed on the moon? Can you recall the day your first child was born? And what did you eat for breakfast last Monday? Many people can still answer the first questions in detail, even when those events happened close to 40 years ago, but they have trouble answering the last. This phenomenon is well known to science. “The emotional context affects memory and learning,” says Dr. Rony Paz, who recently joined the Weizmann Institute’s Neurobiology Department. “Our memories are more easily recalled, and are more vivid, when they are tied to strong emotions. Unfortunately, this means memories connected to traumatic events may be especially powerful.”
 
Paz researches what happens in the brain when emotions and motivations meet cognitive functions. How do our emotions, whether positive or negative, reinforce our memories? How does the expectation of reward affect learning? How do emotional factors affect “rational” decisions, and vice versa: How do we use our rational thinking to control emotions? Disruptions in the delicate balance between feeling and rational thought may be involved in many psychological phenomena – from post-traumatic stress syndrome and anxiety disorders to autism and schizophrenia. Understanding how that balance is achieved might lead to a better understanding of these problems, as well as suggesting better means of treating them.
 
An evolutionarily primitive, almond-shaped structure deep in the brain – the amygdala – is a main neural circuit for processing emotions. Incoming sensory information, on the other hand, is processed in a number of brain areas, including the neocortex – the wrinkled gray matter forming the thin outer layer of the brain – and a small structure found on either side of the brain called the hippocampus. The neocortex and the hippocampus engage in a sort of dialogue, with signals traveling from the neocortex to the hippocampus and back. But when that information is tied to an emotion, the amygdala jumps into the conversation and affects the transfer of signals. “To understand exactly what role the amygdala plays in this discussion, we need to use unconventional methods to observe a whole array of brain activity at once,” says Paz. Using a combi
nation of neurophysiological and behavioral techniques as well as computational and statistical analyses, Paz’s studies capture the activities of both solitary neurons and large, multidimensional networks of brain cells, all at the same time.
 
These findings appeared in Nature Neuroscience, which described them as a “tour de force of neurophysiological behavioral research.” Paz developed his systematic approach while conducting postdoctoral research at Rutgers University, New Jersey, where he began to uncover the role of the amygdala in reinforcing memories with emotional content. By measuring electrical activity of neurons in a number of brain regions simultaneously, he discovered that the amygdala intercepts the signals, intensifying them and realigning them as they’re sent from the neocortex, so they arrive at the hippocampus strong and clear. 
 
Existing memories can also be extinguished. Paz has investigated this phenomenon, as well. “Memory extinction isn’t forgetting,” he says, “but rather new learning that alters the original memory. Essentially, we learn to ‘silence’ the response we learned earlier.” The best model to date points to a specific part of the neocortex that modulates the activities of the amygdala by depressing the emotional response, though exactly how it does this is not clear. This subduing of one part of the brain by another takes place, for instance, when we try to make a “rational” decision: The cognitive, information-processing outer layer suppresses the “gut feelings” of the emotion center. In episodes of post-traumatic stress or panic attacks, the neocortex fails to properly suppress emotion-laden memories, and details of the traumatic event surface uncontrollably.
 
Those who suffer from post-traumatic stress may also have trouble maintaining a separation between one specific event and the general class of similar events.  Generalization is a normal part of the learning process – we learn early on to lump things into categories, so that even if we’ve never seen a particular cup before, we still know we can drink from it. In other words, generalization allows us to apply past experience to unfamiliar situations. But we also learn to remember specific details (e.g., coffee tastes better in the red mug). People who overgeneralize may have difficulty separating a specific incident such as a traffic accident from the broad activity of driving, and they may therefore be more prone to developing a fear of driving after an accident. Paz is now focusing his research on the neurobiological bases of this sort of generalization when emotions or rewards are involved. This research may not only aid in understanding why some people seem more susceptible to post-traumatic stress than others; it may also provide valuable insight into how we manage to achieve a mental balance between specific details and sweeping generalizations. Understanding the mechanisms underlying this balance might also aid in the creation of machines that think and learn like humans.  
 
 Dr. Rony Paz’s research is supported by the Estelle Funk Foundation; the estate of Florence Cuevas, Mineola, NY; Mr. and Mrs. Gary Leff, Calabasas, CA; and Ms. Lois Rosen, Los Angeles, CA.
 

The Math of Neurons

 
Tel-Aviv born and raised, Dr. Rony Paz originally wanted to be a doctor. But after beginning studies at the Hebrew University Medical School, Paz switched to a double major in mathematics and philosophy, a decision that entailed going back and forth between the university’s two campuses on Mount Scopus and Givat Ram. Searching for graduate studies that would combine his two subjects, Paz learned of an interdisciplinary program in computational neuroscience, and went on to receive an M.Sc. and Ph.D. in the field. Paz, who had served in the army as head of a programming unit, held senior R&D positions in several high-tech companies while studying, designing and implementing machine-learning algorithms. He joined the Weizmann Institute’s Neurobiology Department as a senior scientist in 2007.
 
Paz is married to Netta and is father to Iddo, aged two, and Abigail, aged two months.
 
Dr. Rony Paz. Understanding the delicate balance
Life Sciences
English

Observing the Law

English
 
Prof. Tamar Flash and team. Perception and power laws
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
The motions involved in writing, waving goodbye or turning a jumprope all obey the same law of movement. As far back as the 19th century, observers noted that sharper curves are tackled at lower speeds. Anyone thinking of violating this law should think again: Experiments have shown it is nearly impossible to force healthy subjects to generate arm movements that do not conform to this law, today known as the 2/3 power law of motion.
 
Why do the body’s movements comply with the power law? Some have argued that these forms of body movement are simply a byproduct of muscular action. Recent experiments, however, have shown that not only does the 2/3 power law constrain movement generation, it also comes into play when we visually perceive motion. In one such experiment, volunteers were asked to observe a dot on a computer screen that rotated around an ellipse according to one of three scenarios: 1: the dot travels around the ellipse at constant speed; 2: the dot speeds up at the straighter segments of the ellipse, and slows down as it rounds the bend; 3: the dot slows down in the straighter segment of the ellipse and speeds up at the bend. Contrary to intuition, the dot that appeared to the subjects to move more uniformly was not the first dot, which actually moves at a constant speed, but rather the second dot – the one that obeys the 2/3 power law. 
 
Until now, there was little evidence to suggest neural underpinnings to the 2/3 power law, and no one had been able to identify the brain areas that may be involved. Ph.D. student Eran Dayan and Prof. Tamar Flash of the Weizmann Institute’s Computer Science and Applied Mathematics Department, Nava Levit-Binnun of the Institute’s Physics of Complex Systems Department, and Dr. Talma Hendler of the Tel Aviv Sourasky Medical Center, Israel, in collaboration with Antonino Casile and Martin Giese of the Hertie Institute for Clinical Brain Research, Tubingen, Germany, have identified, for the first time, specific brain regions that are selectively activated in response to motion that obeys the 2/3 power law. These findings suggest that the body’s 2/3 power law of motion is controlled by neural mechanisms arising in the brain, as opposed to being a by-product of muscular action. The implication is that such trajectories are planned in detail in the brain prior to their execution. Their findings have recently been published in the journal Proceedings of the National Academy of Sciences (PNAS), USA.
 
In a variation on the original behavioral experiment, the team asked volunteers to observe a cloud of dots rotating around an ellipse according to the same three scenarios while fixing their eyes on a point in the middle of the ellipse. During some experiments, their eye movements were also monitored using special equipment, to eliminate the possibility that the eye movements themselves accounted for the observed results. With the help of functional magnetic resonance imaging, the scientists mapped the areas of the brain that were activated during the task. The results show that different areas of the brain are activated according to the type of motion the volunteers observe. The regions that respond to the 2/3 power law of motion are those that subserve the generation of movement, visual motion processing and action observation. The activation of these areas in response to the 2/3 power law of motion is much stronger than the response to any other form of motion.
 
Why does the brain seem to prefer the 2/3 power law of motion? And why do separate neuronal networks exist for different types of motion? Apart from the idea that the law keeps movement smooth, Flash and her colleagues have come up with a new theory: It all boils down to underlying geometrical features.
 
“After conducting various mathematical and geometrical analyses, we suggest that different areas of the brain seem to be using distinct geometries that take into account such features as curvature or straight lines, and this is why we see different brain areas responding to and generating different types of motion perception and action.”
 
A number of recent brain studies have found a strong coupling between perception and action: Seeing movement can activate the same brain areas as those activated by the physical act itself. Scientists have theorized that this dual activation helps us to learn by imitation as well as to understand the actions of others. The new findings show that this coupling extends to the most basic aspects of motion, and they identify the precise laws that govern the very flow of our movements. They suggest, says Flash, any number of future lines of research into how the brain is organized to control and perceive movement, as well as how possible impairments in these processes may be involved in neurological diseases. 
 
Brains see motion differently
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
Prof. Tamar Flash’s research is supported by the Manfred D. Moross Laboratory for Vision Research and Robotics; and Sylvia and Henry Legrain, Spain. Prof. Flash is the incumbent of the Dr. Hymie Moross Professorial Chair.
 
 
(l-r) Prof. Tamar Flash, Dr. Talma Hendler and Eran Dayan. Setting the speed limit
Life Sciences
English

Bat Memories

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Dr. Nachum Ulanovsky. Bats in the lab
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
Perhaps because bats fly at night, they easily provoke fears and conjure up eerie visions of witches and vampires. Yet in Chinese mythology bats are happy omens, portending good luck. And at the Weizmann Institute, bats promise to bring good fortune by helping reveal the secrets of human memory.
 
These chatty nocturnal mammals – who constantly communicate with one another through high-pitched shrieks and clicks – have long been used in the study of hearing. But in addition, bats have remarkable navigational and memory skills. Thus fruit bats, the most common bat species in Israel and the one studied at Weizmann, have no problem returning to the same cave, no matter how small, after covering distances of dozens of kilometers in the course of the night.
 
Dr. Nachum Ulanovsky, who recently joined the Weizmann Institute as a senior scientist in the Neurobiology Department, has pioneered the use of bats in the study of learning and memory. According to him, bats are an excellent research model in this area not only because of their impressive spatial memory but also due to their highly developed senses and unique behaviors. “Most studies of memory-related brain activity have been done with rats and mice,” he points out, “and it’s important to perform a ‘reality check’ to see whether those findings are relevant for other mammals. By comparing different animals we can find the features that all mammals have in common, and such features can help us understand our own memory.”
 
Ulanovsky is particularly interested in the brain area called the hippocampus, a bunch of cells on either side of the brain that is responsible for spatial navigation and episodic memory. As opposed to motor memory (remembering how to ride a bike) or factual memory (knowing the name of the queen of England), episodic memory deals with day-to-day events and enables us to remember what we did yesterday, for instance, or whom we met two days ago.
 
The central role of the hippocampus in episodic memory is mainly known from the classical case of a patient who in the 1950s had his hippocampus removed and lost the ability to remember new events as a result. However, it is still unknown which nerve cells or neuronal networks are involved in episodic memory, and that is precisely what Ulanovsky seeks to find out by using bats.
 
He intends to study the brain activity of bats as they fly or crawl. In the “flight room” in his lab, bats will be outfitted with advanced telemetry equipment that transmits information about the activity of individual neurons or neuronal networks as the bat performs certain tasks in flight. The relatively large Israeli fruit bat is perfect for such studies: At 150 grams it can fly while carrying about 9 grams of equipment. Telemetry systems are generally heavy, but this miniature device – a world first – has been developed in the past two years by an American company in collaboration with Ulanovsky. The nerve cell signals will be picked up by another kind of innovative equipment developed in the 1990s: tetrodes – micro-electrodes that have four wires instead of one – enabling a more precise recording of the activity of individual nerve cells. Ulanovsky started using these technologies during his postdoctoral studies at the University of Maryland, where he made a number of significant discoveries about the bat hippocampus.
 
An additional room in Ulanovsky’s lab will be devoted to the study of crawling bats, the goal being to find out how the brain processes and remembers sounds over time. Yet another experimental room will be devoted to behavioral studies. To avoid disrupting their natural behavior, the bats will all share one large, cave-like space with rough-hewn rocks in the ceiling.
 
Ulanovsky also conducts field studies in collaboration with the Hebrew University of Jerusalem. The bats’ bodies are outfitted with the smallest GPS system in the world – 10 grams including the battery – which was specially developed for this research.
 
These studies promise to shed new light not only on human memory but also on diseases involving the hippocampus, including epilepsy and such neurodegenerative diseases as Alzheimer’s. And while the bats continue to chat away in a language we don’t understand, other discoveries might emerge from the study of their outstanding capabilities. 
 
Dr. Nachum Ulanovsky’s research is supported by the A.M.N. Fund for the Promotion of Science, Culture and Arts in Israel; and the Chais Family Fellows Program for New Scientists.
 
Lessons from a fruit bat
 
 

The Return Home

Dr. Nachum Ulanovsky immigrated to Israel with his parents from Moscow in 1973 as a four-month-old baby. The family settled in Rehovot, where Nachum took part in youth activities at the Weizmann Institute. “I feel now as if I’ve returned home,” he says. “New buildings and new roads have been built at the Institute; only the swimming pool has remained the same.” Ulanovsky enrolled in Tel Aviv University’s physics faculty at age 16. He served in the intelligence corps of the Israel Defense Forces and during his army service started taking courses in neurobiology. He then earned a Ph.D. in neural computation from the Hebrew University of Jerusalem. He lives on the Weizmann campus with his wife and three children, has a passion for outdoor activities, such as hiking, sea kayaking, scuba diving and canyoneering, and is a certified rappelling instructor.

 
Dr. Nachum Ulanovsky. Neurons in flight
Life Sciences
English

Staying Alive

English
Prof. Idit Shachar. Returning the self-destruct program
 
 
 
 
One of the characteristics of cancer cells is their refusal to die. In chronic lymphocytic leukemia (CLL), a blood cancer, white blood cells called B lymphocytes, or B cells, lose the internal self-destruct program for limiting their lifespan. Instead of maintaining a steady turnover in the blood, their numbers continue to grow, building up to dangerous levels in the blood, bone marrow and lymph nodes.
 
A team of scientists headed by Prof. Idit Shachar of the Weizmann Institute’s Immunology Department and Dr. Michal Haran of the Kaplan Medical Center’s Hematology Institute recently discovered what keeps CLL cells alive. This survival mechanism, they found, is vulnerable to attack by antibodies that target it, causing the cancer cells to die. Their findings, which appeared recently in Proceedings of the National Academy of Sciences (PNAS), USA, may lead to future treatments for this disease, as well as for other diseases in which B lymphocytes accumulate in the blood.
 
The short life of a B cell involves an intricate give and take between the self-destruct mechanism and other factors that keep the cell alive. In previous research, Shachar had found that a specific receptor – a protein on the outer surface of healthy B cells – plays a vital role in helping the cells survive. She wondered if the same protein might also be a central player in the abnormally high survival rates of cancerous B cells. 
 
Members of Shachar’s research team, including Inbal Binsky, Diana Starlets, Yael Gore and Frida Lantner, together with Kaplan Medical Center doctors Haran, Lev Shvidel, Prof. Alan Berrebi and Nurit Harpaz; as well as scientists from Yale University and David Goldenberg of the Garden State Cancer Center in New Jersey, examined B cells taken from CLL patients. They discovered that even in the earliest stages of the disease, these cells have an unusually high level of this survival receptor. The scientists found that the act of protein binding to the receptor initiates a series of events within the cell that results in enhanced cell survival. One of the substances produced in this chain of events helps to regulate the cell’s lifespan, resulting in the maintenance of cell survival.
 
The team treated the CLL cells with an antibody that recognizes the survival receptor, blocking its activity and causing the cancer cell death rate to soar.
 
The antibodies they used are produced by the firm Immunomedics, in New Jersey, and are currently entering clinical trials for the treatment of several different types of cancer. Following this research, which has revealed the mechanism of the antibody’s actions, the company is planning trials for CLL as well.
 
Shachar: “The abnormally elevated levels of this receptor seem to be important factors in the development of this disease, right from the beginning, and they are responsible for the longevity of these cancerous B cells. Blocking the receptor or other stages in the pathway they activate might be a winning tactic, in the future, in the war against cancers involving B cells.”  
 
Prof. Idit Shachar’s research is supported by the Kirk Center for Childhood Cancer and Immunological Disorders; the Weizmann Institute of Science-Yale Exchange Program; the Abisch Frenkel Foundation for the Promotion of Life Sciences; and the Phyllis and Joseph Gurwin Fund for Scientific Advancement. Prof. Shachar is the incumbent of the Dr. Morton and Anne Kleiman Professorial Chair.
 
Prof. Idit Shachar
Life Sciences
English

Going to the Heart

English
Dr. Eldad Tzahor and his team. Developing together

 

 
 
 
Our hearts are made of strong muscle that has one task: to pump blood day and night. Our faces, on the other hand, use 60 different muscles to smile, frown, chew or talk. A team of Institute scientists has now shown that the development of the one is closely tied to the development of the other.
 
In a series of three articles that appeared in the scientific journal Development, Dr. Eldad Tzahor and research students Libbat Tirosh, Ariel Rinon and Elisha Nathan of the Biological Regulation Department reported surprising findings that have come out of their research into the development of facial muscles in the embryo. Heart and skeletal muscles both arise from the middle layer of embryonic cells – the mesoderm – although their developmental programs are distinctly separate. These mesoderm cells are no longer embryonic stem cells that can become any kind of organ or tissue. Rather, they are progenitor cells – cells that are just beginning to “commit” to becoming a particular type of tissue, such as kidney or muscle.
 
The scientists, therefore, were astonished when they removed facial muscle progenitor cells from their “natural setting” in the embryo and grew them in a cell culture in the lab. The cells that appeared to be destined to become facial muscle developed into heart muscle and even began beating. This finding provides strong evidence that these mesoderm cells are equipped with a “default plan.” Normal embryonic development involves “cross-talk” between the developing cells, and previous research in Tzahor’s lab had shown that this ongoing discussion helps direct the various cells down a particular developmental path. It seems that in the absence of signals from other sources, the cells switch to the default plan and become heart cells.
 
Another study in Tzahor’s lab revealed that some of the mesoderm progenitors that contribute to the facial muscles actually end up in the heart and become ensconced in the heart tissue near the exits of the two large blood vessels, the aorta and the pulmonary artery. As these areas are particularly prone to congenital birth defects (about one in 100 newborns is diagnosed with a heart defect), these findings take on special significance for medical research. In this study, the team also identified a specific protein that directs the differentiation of the muscle progenitor cells into one of these two cell fates, skeletal muscle or heart. When they added this protein to early chicken embryos, their facial muscle progenitor cells began to exhibit some characteristics of heart cells.
 
Further studies brought more revelations. Oneof the differences long believed to exist between heart and skeletal muscle is that skeletal muscles can regenerate when damaged, whereas the heart was thought to be a non-renewable organ. But recent studies have identified specific heart muscle progenitor cells in the mesoderm that produce a protein known as Islet-1. Islet-1 is tied to the ability to regenerate, and cells producing it have been shown to migrate to various parts of the heart, where they are thought to act as “reserves.” Tzahor and his team tagged heart progenitor cells that produce Islet-1 in mouse and chicken embryos, to follow their development. To their great surprise, while some of these cells did indeed end up in the heart, others migrated to certain facial muscles, especially those that open the lower jaw.
 
What is the developmental connection between facial muscles and the heart? The answer, says Tzahor, may be rooted in our evolutionary past: In worms – creatures with no heart – the head muscles used for swallowing also function to keep the circulatory system moving. So the ties between the two may be remnants from an earlier developmental plan.
“The developmental processes in the heart and face are intricately tied to each other,” says Tzahor. “The complex interactions they engage in are precisely orchestrated and are vital to the healthy functioning of both. Solving the molecular component of their developmental plans is the key to understanding the genetic and cellular basis of the many birth defects that affect both heart and face.” In the future, this understanding may lead, among other things, to the development of ways to treat degenerative diseases that affect heart and skeletal muscle. 
 

Dr. Eldad Tzahor’s research is supported by the Kekst Family Center for Medical Genetics; the Willner Family Leadership Institute for the Weizmann Institute of Science; and the Estelle Funk Foundation. Dr. Tzahor is the incumbent of the Gertrude and Philip Nollman Career Development Chair.

 

Taking the Lead

 
Yet another study by Tzahor’s team demonstrates the importance of communication between cells for healthy tissue development. Neural crest cells originate in the ectoderm, the outer layer of embryonic tissue, and they have the ability to differentiate into a wide variety of cell types. In the face, these cells give rise to most of the bone, cartilage and connective tissue. But the researchers found that these cells perform yet another function: They oversee the developmental plan for the facial muscles. Neural crest cells take those mesoderm cells slated to become facial muscle, “lead” them to the correct place on the developing head and instruct them to begin the process of differentiating into muscle tissue.
 
(l-r) Elisha Nathan, Ariel Rinon, Libbat Tirosh and Dr. Eldad Tzahor. Heart and face
Life Sciences
English

Watch for Exploding Stars

English
Dr. Avishay Gal-Yam. Dwarves explode with the help of giants

 

 
 
 
When dwarves explode, they do so with the help of giants – at least when the dwarves and giants are stars. Exploding white dwarf stars leave behind a rapidly expanding cloud of “stardust” known as a Type Ia supernova. These events, which shine billions of times brighter than our sun, are all presumed to be extremely similar and thus have been used extensively as cosmological reference beacons to trace distance and the evolution of the universe.
 
Astronomers have now – for the first time ever – provided a unique set of observations, enabling them to find traces of the material that had surrounded a white dwarf star before it exploded. No Type Ia supernova event has ever before been observed at this level of detail over a several-month-long period following the explosion. 
 
These results were recently published in the journal Science. The data were collected from the ESO Very Large Telescope in Chile and the 10-meter Keck telescope in Hawaii by two teams of researchers: The one at ESO was headed by Dr. Ferdinando Patat, and the Keck team, based at the California Institute of Technology, USA, was led by Dr. Avishay Gal-Yam. Gal-Yam recently joined the Weizmann Institute’s Condensed Matter Physics Department.
 
The data the scientists collected provided evidence to support a widely accepted model for Type Ia supernovae, one in which a white dwarf star interacts with a companion star – a red giant. The white dwarf is small but extremely dense; and because of its strong gravitational pull, it continually feeds on gases from its giant companion. When the mass of the white dwarf grows past a critical value, it explodes.
 
Combining their observations, which took place over the course of four months, with archival data, the astronomers detected the presence of a number of expanding shells surrounding a Type Ia supernova event. The makeup of these shells suggests they are the remnants of the red giant star that fed the white dwarf.   
 
Dr. Avishay Gal-Yam’s research is supported by the Nella and Leon Benoziyo Center for Astrophysics.
 

Physicist to the Stars

 
Dr. Avishay Gal-Yam was born in Jerusalem and, after serving as an officer in the IDF, received his Ph.D. in physics and astronomy from Tel Aviv University. From Tel Aviv, he moved to California to conduct postgraduate research at the California Institute of Technology (Caltech). He was drawn to astrophysics, he says, because “many of the fundamental parameters of physics can be measured through astrophysical studies. Astrophysics is a window on the makeup of the universe.”
 
Beginning with his Ph.D. research, Gal-Yam has searched for supernovae in massive galaxy clusters. His calculations of the lifespan of these stars – from their formation to the final, brilliant explosion – have provided evidence as to the type of star system that ends its days as a supernova. While at Caltech, Gal-Yam assembled a large group of scientists to observe fifty instances of so-called core-collapse supernovae, and the scientists are now using these data to understand the physical processes involved in core collapse. 
 
Gal-Yam joined the Weizmann Institute in 2007. He is married and the father of three children. He enjoys playing sports, and he and his family like to travel and hike together.
 
Dr. Avishay Gal-Yam
Space & Physics
English

Memory’s Gatekeeper

English
Dudai and his team. Active memory supression
 
 

 

Everyone has repressed memories.Though most of the time we’re unaware of it, that action can spare us emotional pain and embarrassment, and even preserve our internal world view. The failure of this normal mechanism, however, may result in emotional and cognitive problems. What prevents certain memories from surfacing while others flood our consciousness at will? Where is the elusive gatekeeper that keeps some memories firmly outside the doors of our awareness? Prof. Yadin Dudai, Head of the Neurobiology Department, and his research team recently shed light on memory repression and pinpointed an area in the brain that acts as memory’s gatekeeper.
 
Their study used an intriguing phenomenon, dubbed “post-hypnotic amnesia” – a transient, controlled loss of specific memories following a hypnotic session. The research, which relied on advanced brain imaging techniques, was recently featured in Neuron. Dudai and research student Avi Mendelson, together with medical hypnosis experts Dr. Yossi Chalamish and Prof. Alexander Solomonovich of the Wolfson Medical Center, chose as their research subjects people who are especially susceptible to hypnotic suggestion. In these volunteers they were able to induce post-hypnotic amnesia: While under hypnosis, the subjects were told to forget, upon exiting the hypnotic state, particular events they had experienced a week earlier. When a specific signal agreed upon by the subject was given later, the memory loss was reversed, allowing the subject to recall the repressed memories. 
 
Dudai and his team produced a 45-minute documentary, which they then showed to the participants. A week later, the same participants returned for the second half of the experiment. One by one, they entered the functional magnetic resonance imaging (fMRI) scanner and underwent hypnosis. Once under, they were told to forget the film upon waking and were also instructed as to the signal. The subjects were brought out of hypnosis and, while still being scanned in the fMRI, were given a quiz that included questions about both the film and the room in which the film was screened. They were then given the signal to remember and asked to retake the quiz. A control group followed the same routine, but did not undergo post-hypnotic amnesia.
 
The hypnosis subjects could not recall the details of the film the first time they took the quiz, though they did remember the context in which the film was screened. The second time, after receiving the agreed-upon signal, they were able to recall the film as well. In other words, their memory of the film had not been lost, only repressed. In analyzing the fMRI data, the scientists noted that some parts of the brains of those experiencing post-hypnotic amnesia had depressed levels of activity in specific brain circuits, but, interestingly, in one small area the activity was significantly heightened. This area is part of a larger area called Brodmann area 10, which is involved, among other things, in memory retrieval. They concluded that the area they identified “vetoes” the recall of specific items in long-term memory. Further research along these lines might shed light on common memory problems such as functional amnesia or cognitive and behavioral pathologies associated with the overrepression of certain memories.     
 
Prof. Yadin Dudai’s research is supported by the Norman and Helen Asher Center for Brain Imaging; the Nella and Leon Benoziyo Center for Neurological Diseases; the Carl and Micaela Einhorn-Dominic Brain Research Institute; the Irwin Green Alzheimer’s Research Fund; Mr. Rowland Schaefer, New York, NY; and the Sylvia and Martin Snow Charitable Foundation. Prof. Dudai is the incumbent of the Sara and Michael Sela Professorial Chair of Neurobiology.
 
Prof. Yadin Dudai, Uri Nili, Avi Mendelson, Nahum Stern, Rachel Ludmer, Dr. Yossi Chalamish and Efrat Furst. Hypnotic scan
Life Sciences
English

Living Force

English

Dr. Nir Gov. The shapes of cells

The number of “species” in the “genus” Scientist is diverse – ranging from biologists to geneticists, chemists to physicists, and everything in between – each adapted to his or her own particular niche. What would happen if two such species were to “crossbreed”? Once inconceivable, a viable and growing population of physicists engaging in biology research has arisen in the past few years. Says Dr. Nir Gov of the Institute’s Chemical Physics Department in the Faculty of Chemistry: “With scientific equipment becoming ever more powerful, biologists are beginning to face gridlock in the vast amount of data they’ve accrued. Some physicists have seen this as an invitation to help biologists understand phenomena on a more fundamental level and, in the process, discover new physical principles that are unique to active, living matter.”
 
One area that Gov and his research team have been actively studying is how cells get their variety of shapes. Hair cells in the ear, for example, grow finger-like protrusions on their outer surface, and these are organized into rows of graded length. These fingers (stereocilia) convert sound vibrations to electrical signals that are then relayed to the brain. Biologists can now describe in detail the different stages of ear cell formation in a developing embryo, from the initial “deaf” stages, when the nascent fingers start growing in a disorderly fashion, to the final, highly ordered structure. Peeling away the outer membrane of these fingers reveals a scaffold-type protein structure – the cytoskeleton – within the stereocilia, and this scaffolding is the driving force behind their formation. Yet biologists still do not know exactly how stereocilia development takes place. For this, another layer needs to be peeled away to reveal the “invisible forces” that are at play. Gov: “By ‘forces,’ we mean such things as tension, compression, friction, and kinetic and chemical energies – physical mechanisms that act on the objects in a given system. Putting these basic ingredients together in equations gives us mathematical models. We can then use our models to make quantitative predictions about how cellular formations arise and how they behave under various conditions – predictions which can then be tested experimentally.”

 

Hair cells in the ear

 
The model that Gov and his team have been building starts with ATP – the energy currency of the cell. ATP causes elements in the protein scaffold structure – a tight bundle of protein filaments – to dissociate from and re-associate with each other. When balanced by forces in the membrane, the cell’s outer shape remains roughly constant; but the forces exerted by the scaffold proteins also deform the membrane, giving rise to the growth of the finger-like protrusions. The researchers have calculated how these forces exerted on the membranes initiate the process, and a group of experimentalists has recently validated some of their predictions.
 
The same mathematical model has helped the biophysicists gain insights into other, similar systems. For example, another member of Gov’s team is working on brain cells, which grow branched spines for communicating with their neighbors. The basic process underlying their growth appears to be the same as that which initiates the formation of the ear cell fingers, and it  may apply, as well, to the finger-like protrusions of both immune cells and cancer cells that are essential to motility.  

Dr. Nir Gov is the incumbent of the Alvin and Gertrude Levine Career Development Chair.
Dr. Nir Gov. The physics of fingers, hair and spines
Chemistry
English

The Music in the Quantum Noise

English
Dr. Ehud Altman. Quantum fluctuation
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
If classical physics called the tune, particles would become as still and silent as statues when the temperature reached absolute zero; but these particles actually continue to dance to the music of quantum mechanics, down to the very lowest degree. Is it possible to detect the hum of this so-called zero-point motion?
 
Advances in technology have facilitated the cooling of large collections of atoms to the dazzlingly low temperature of only one billionth of a degree above absolute zero – even colder than the outer limits of the universe. This breakthrough led to the observation of a new kind of quantum matter: the Bose-Einstein Condensate (BEC). Recently, Dr. Ehud Altman of the Weizmann Institute’s Condensed Matter Physics Department, in collaboration with Prof. Eugene Demler of Harvard University and Prof. Anatoli Polkovnikov of Boston University, USA, developed a novel idea: Experiments with ultracold atoms could serve as a means to directly observe the quantum fluctuations inside matter and detect new phases of that matter.
 
A BEC contains an enormous number of non-interacting atoms that, at very low temperatures, start to behave less like particles and more like waves. Each atomic wave starts to overlap with that of its neighbor, and they go through a sort of collective quantum “identity crisis,” losing their individuality to join in one big wave. When two separate BECs are allowed to expand and overlap each other, a striped pattern emerges in the gas cloud. This phenomenon – like overlapping ripples when two stones are thrown into a pond – is a direct testament to the wave nature of quantum particles. A BEC in which the waves “dance in unison” is said to be a very orderly state of matter. (In physicists’ language: The phase of the waves is not fluctuating.) Thanks to this property, the interference pattern is so incredibly sharp that the exact shape of the stripes is reproducible from one experiment to the next.
 
But what happens in a system in which the interactions between particles become increasingly important? This occurs, for example, when the particles can move in only a single line or a two-dimensional plane. The waves associated with different particles become entangled with one another, resulting in quantum fluctuations that disrupt the stately “dance in unison,” turning it into more of a frenetic jitterbug. In recent work published in the Proceedings of the National Academy of Sciences (PNAS), USA, Altman and his colleagues explained that these fluctuations should be observable in the interference patterns in one- or two-dimensional condensates. The stripes appearing in the interference patterns will exhibit twists and wiggles that change from one experiment to the next. Like the discordant vibrations of badly tuned guitar strings, these wiggles appear to be noise. Altman and his colleagues showed however, that they have some interesting statistical properties and thus are not noise at all, but the footprints left by quantum fluctuations. The team calculated the properties of these wiggles and explained how they could enable experimentalists to directly observe the workings of quantum mechanics in matter. Indeed, the theory developed by Altman and his collaborators has successfully been applied experimentally by a group from ENS, Paris, who observed, for the first time, an elusive phase transition in a system of ultracold atoms.
 
In another paper, published recently in Nature Physics, Altman and his colleagues investigated in greater detail the random fluctuations in the sharpness of the interference pattern. They showed that the fluctuations follow a remarkable probability distribution – one that usually describes rare but catastrophic events, such as stock market crashes and earthquakes.
 
These findings have practical value: They could facilitate the development of measurement devices that would be able to measure very slight changes in the gravitational field by tracking phase changes between two BECs. These could be used, for example, in mapping geological layers in search of oil, or as gravity wave detectors for cosmological experiments.  

Dr. Ehud Altman’s research is supported by the Asher and Jeannette Alhadeff Research Award.
 
interference patterns reveal quantum phenomena
 

 

 
 
 
 
 
 
 
 

 

Crowd Behavior

 
Transitions between different forms of organization in matter are often driven by changes in temperature, which is a measure of the random motion of atoms inside the material. Take water, for example: As we lower the temperature, the particles slow down until they organize into the crystal structure we know as ice. When temperatures fall to near absolute zero, we might imagine that matter comes to a complete standstill, cutting short opportunities for change. But in this extreme deep freeze, the quantum mechanical nature of the particles comes into play. Quantum fluctuations – a consequence of quantum uncertainty, the principle stating that it is impossible to know the exact position of an atom and its speed simultaneously – open up possibilities for matter to organize in dramatically new and unforeseen ways.
 
Under the laws of quantum mechanics, the motion and behavior of single particles, strange as they may appear to us, are by now well understood. But how do quantum mechanical principles such as particle-wave duality and the uncertainty principle affect the collective behavior of the hordes of interacting particles that make up matter? This question, which Altman addresses in his research, is one of the more significant challenges facing physics today.
 
 
 
Dr. Ehud Altman. Quantum wiggles
Space & Physics
English

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